BIONLP 2017 Workshop Schedule
Friday August 4, 2017 | |
8:30–8:45 | Opening remarks |
8:45–10:30 | Session 1: Prediction and relation extraction |
8:45–9:00 |
Target word prediction and paraphasia classification in spoken discourse
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9:00–9:15 |
Extracting Drug-Drug Interactions with Attention CNNs
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9:15–9:30 |
Insights into Analogy Completion from the Biomedical Domain
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9:30–9:45 |
Deep learning for extracting protein-protein interactions from biomedical literature
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9:45–10:00 |
Stacking With Auxiliary Features for Entity Linking in the Medical Domain
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10:00–10:30 |
Invited Talk: Results of the 5th edition of BioASQ Challenge Speaker: Georgios Paliouras |
10:30–11:00 | Coffee Break |
11:00–12:30 | Session 2: BioASQ 2017 and more |
11:00–11:15 |
Tackling Biomedical Text Summarization: OAQA at BioASQ 5B
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11:15–11:30 |
Macquarie University at BioASQ 5b -- Query-based Summarisation Techniques for Selecting the Ideal Answers
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11:30–11:45 |
Neural Question Answering at BioASQ 5B
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11:45–12:00 |
End-to-End System for Bacteria Habitat Extraction
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12:00–12:15 |
Creation and evaluation of a dictionary-based tagger for virus species and proteins
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12:15–12:30 |
Representation of complex terms in a vector space structured by an ontology for a normalization task
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12:30–14:00 | Lunch break |
14:00–15:30 | Session 3: From bio to clinical NLP |
14:00–14:15 |
Improving Correlation with Human Judgments by Integrating Semantic Similarity with Second--Order Vectors
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14:15–14:30 |
Proactive Learning for Named Entity Recognition
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14:30–14:45 |
Biomedical Event Extraction using Abstract Meaning Representation
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14:45–15:00 |
Detecting Personal Medication Intake in Twitter: An Annotated Corpus and Baseline Classification System
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15:00–15:15 |
Unsupervised Context-Sensitive Spelling Correction of Clinical Free-Text with Word and Character N-Gram Embeddings
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15:15–15:30 |
Characterization of Divergence in Impaired Speech of ALS Patients
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15:30–16:00 | Coffee Break |
16:00–16:30 | Session 3: More clinical NLP |
16:00–16:15 |
Deep Learning for Punctuation Restoration in Medical Reports
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16:15–16:30 |
Unsupervised Domain Adaptation for Clinical Negation Detection
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16:30–18:00 | Poster Session |
BioCreative VI Precision Medicine Track: creating a training corpus for mining protein-protein interactions affected by mutations
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Painless Relation Extraction with Kindred
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Noise Reduction Methods for Distantly Supervised Biomedical Relation Extraction
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Role-Preserving Redaction of Medical Records to Enable Ontology-Driven Processing
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Annotation of pain and anesthesia events for surgery-related processes and outcomes extraction
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Identifying Comparative Structures in Biomedical Text
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Tagging Funding Agencies and Grants in Scientific Articles using Sequential Learning Models
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Deep Learning for Biomedical Information Retrieval: Learning Textual Relevance from Click Logs
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Detecting Dementia through Retrospective Analysis of Routine Blog Posts by Bloggers with Dementia
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Protein Word Detection using Text Segmentation Techniques
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External Evaluation of Event Extraction Classifiers for Automatic Pathway Curation: An extended study of the mTOR pathway
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Toward Automated Early Sepsis Alerting: Identifying Infection Patients from Nursing Notes
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Enhancing Automatic ICD-9-CM Code Assignment for \\Medical Texts with PubMed
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Evaluating Feature Extraction Methods for Knowledge-based Biomedical Word Sense Disambiguation
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Investigating the Documentation of Electronic Cigarette Use in the Veteran Affairs Electronic Health Record: A Pilot Study
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Automated Preamble Detection in Dictated Medical Reports
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A Biomedical Question Answering System in BioASQ 2017
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Adapting Pre-trained Word Embeddings For Use In Medical Coding
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Initializing neural networks for hierarchical multi-label text classification
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Biomedical Event Trigger Identification Using Bidirectional Recurrent Neural Network Based Models
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Representations of Time Expressions for Temporal Relation Extraction with Convolutional Neural Networks
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Automatic Diagnosis Coding of Radiology Reports: A Comparison of Deep Learning and Conventional Classification Methods
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Automatic classification of doctor-patient questions for a virtual patient record query task.
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Assessing the performance of Olelo, a real-time biomedical question answering application
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Clinical Event Detection with Hybrid Neural Architecture
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Extracting Personal Medical Events for User Timeline Construction using Minimal Supervision
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Detecting mentions of pain and acute confusion in Finnish clinical text
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A Multi-strategy Query Processing Approach for Biomedical Question Answering: USTB\_PRIR at BioASQ 2017 Task 5B
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